- Spotter: Find circular objects in images quickly and efficently. This tool is focused on high throughput accurate counting of images. Currently the tool can be run on a single file or an entire folder of images while putting all output data into a CSV file. The configurations used to find different types of objects can be saved and reused.Spotter v1.01 WindowsSpotter v1.01 MacOSX
- R code for Truong et al (2020) – The multi-dimensional embryonic zebrafish platform predicts flame retardant bioactivity.
- Dataset for Green et al (2024) – PIOS Comp Bio – Deep autoencoder-based behavioral pattern recognition outperforms standard statistical methods in high-dimensional zebrafish studies
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Department of Environmental and Molecular Toxicology; Oregon State University; Sinnhuber Aquatic Research Laboratory